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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4383: 12751 - Hypothetical Protein, at 63561 to 65177
12751
mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65499 to 68176
12752
mRNA_4385: 12753 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 68273 to 69417
12753
mRNA_4386: 12754 - BLAST polysaccharide lyase family 14 protein [Hypholoma sub..., at 70020 to 71335
12754
mRNA_4387: 12755 - HMMPfam-Ctf8-PF09696, at 71691 to 72315
12755
Group
Condition
mRNA_4383
mRNA_4384
mRNA_4385
mRNA_4386
mRNA_4387
12751
12752
12753
12754
12755
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.3
0.5
0.4
-2.5
growth on ricinoleic acid
YNB Glucose
-0.3
0.1
0.2
-0.1
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.1
0.1
-0.3
-0.2
auxotrophy
Dropout Complete
0.2
-0.1
0.2
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
0.0
-0.3
-0.6
auxotrophy
YNB Glucose
-0.2
0.2
0.1
-0.4
-0.3
growth on ypd
YPD
0.3
-0.1
-0.1
-0.1
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
0.8
0.3
-1.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.1
0.1
-0.1
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
0.1
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.2
0.5
-0.3
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
-0.2
-0.3
0.2
1.5
growth on oleic acid
YNB Oleic Acid
0.2
0.1
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.4
0.4
-0.8
growth on oleic acid
YNB Glucose
0.0
-0.1
0.3
-0.3
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
0.6
-0.8
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.0
0.2
0.3
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.1
0.4
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.3
-0.3
0.7
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
0.3
-0.2
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.0
0.1
-0.0
1.0
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