Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4371: 12739 - K10877 RAD54B DNA repair and recombination protein RAD54B, at 32512 to 35317 12739 mRNA_4372: 12740 - KOG2533 Permease of the major facilitator superfamily, at 38452 to 41065 12740 mRNA_4373: 12741 - SUPERFAMILY--SSF52058, at 41270 to 42990 12741 mRNA_4374: 12742 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 43132 to 46033 12742 mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46350 to 49394 12743
Group Condition mRNA_4371 mRNA_4372 mRNA_4373 mRNA_4374 mRNA_4375
12739
12740
12741
12742
12743
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.3 0.2 -2.4 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.3 -0.3 -0.8 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.5 -2.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 -0.3 -0.2 -0.8
growth on ypd YPD -0.4 -0.4 -0.4 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.5 -0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.5 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.3 -0.3 -0.2 0.1
growth on oleic acid YNB Glucose -0.2 -0.2 0.1 -0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 0.0 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.0 -0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 -0.2 0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 0.2 -0.2 0.3
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.3 -0.9 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.1 -0.1 -0.5 0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.2 -0.1 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.1 0.1 0.2 -0.2 0.2
auxotrophy Dropout Complete 0.4 -0.4 -0.1 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.5 0.2 0.0 -0.4 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.3 0.2 -0.1 0.1
auxotrophy YNB Glucose 0.3 0.3 0.0 0.0 0.1
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