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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22211 to 24480
12734
mRNA_4367: 12735 - K08856 STK16 serine/threonine kinase 16, at 24559 to 26572
12735
mRNA_4368: 12736 - K00652 bioF 8-amino-7-oxononanoate synthase, at 26670 to 28178
12736
mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29253 to 29815
12737
mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30221 to 32027
12738
Group
Condition
mRNA_4366
mRNA_4367
mRNA_4368
mRNA_4369
mRNA_4370
12734
12735
12736
12737
12738
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-2.9
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.7
-0.4
growth on ricinoleic acid
YNB Glucose
-0.3
-0.3
-0.2
auxotrophy
YNB Glucose
0.1
-0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.8
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.0
0.0
growth on oleic acid
YNB Glucose
0.2
-0.6
0.1
auxotrophy
Dropout Complete
0.3
0.3
-0.8
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
-1.5
0.5
growth on oleic acid
YNB Oleic Acid
0.3
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.5
-0.2
growth on ypd
YPD
0.3
-0.5
0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.8
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
-0.6
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.5
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.8
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.4
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.2
0.9
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