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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4362: 12730 - KOG0907 Thioredoxin, at 6490 to 7048
12730
mRNA_4363: 12731 - K19562 BIO3-BIO1 bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase, at 7688 to 10353
12731
mRNA_4364: 12732 - SUPERFAMILY--SSF48371, at 10623 to 17699
12732
mRNA_4365: 12733 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920, at 18950 to 21856
12733
mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22211 to 24480
12734
Group
Condition
mRNA_4362
mRNA_4363
mRNA_4364
mRNA_4365
mRNA_4366
12730
12731
12732
12733
12734
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-1.5
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.0
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
-0.6
growth on ypd
YPD
-0.4
-0.2
-0.1
auxotrophy
YNB Glucose
0.3
-0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.5
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.1
auxotrophy
Dropout Complete
0.0
0.6
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.3
0.6
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.4
-0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.3
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.4
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
1.0
-0.1
growth on oleic acid
YNB Glucose
0.5
0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
1.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.9
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.8
0.4
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