Fitness for 4 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4347: 12715 - K03386 PRDX2_4, ahpC peroxiredoxin (alkyl hydroperoxide reductase subunit C), at 1965895 to 1967093 12715 mRNA_4348: 12716 - KOG2265 Nuclear distribution protein NUDC, at 1967536 to 1968862 12716 mRNA_4349: 12717 - K02873 RP-L13e, RPL13 large subunit ribosomal protein L13e, at 1969971 to 1971273 12717 mRNA_4350: 12718 - K03635 MOCS2, moaE molybdopterin synthase catalytic subunit, at 1971596 to 1972460 12718
Group Condition mRNA_4347 mRNA_4348 mRNA_4349 mRNA_4350
12715
12716
12717
12718
auxotrophy YNB Glucose -1.0   -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.8   -0.5 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   -1.1 0.3
auxotrophy Dropout Complete -0.5   -0.7 0.2
growth on ricinoleic acid YNB Glucose -1.0   0.2 0.0
auxotrophy YNB Glucose 75mM Methionine -0.7   0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7   -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3   -0.3 0.1
growth on oleic acid YNB Oleic Acid -1.1   0.9 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.5   0.3 0.0
growth on oleic acid YNB Glucose -0.8   0.8 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6   0.6 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3   0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0   0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   0.8 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5   0.8 0.3
growth on ypd YPD -0.2   0.5 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6   1.0 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.4   0.9 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4   1.7 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0   2.1 0.5
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