Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4342: 12710 - K08801 PASK PAS domain containing serine/threonine kinase, at 1951654 to 1955244 12710 mRNA_4343: 12711 - K15206 TFC7 transcription factor C subunit 7, at 1955743 to 1957166 12711 mRNA_4344: 12712 - HMMPfam-Secretory lipase-PF03583,SUPERFAMILY--SSF53474, at 1957687 to 1959260 12712 mRNA_4345: 12713 - K04706 PIAS1 E3 SUMO-protein ligase PIAS1, at 1959851 to 1962070 12713 mRNA_4346: 12714 - K18754 LIN28 protein lin-28, at 1962834 to 1965398 12714
Group Condition mRNA_4342 mRNA_4343 mRNA_4344 mRNA_4345 mRNA_4346
12710
12711
12712
12713
12714
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.6 -2.1 0.1
auxotrophy Dropout Complete 0.1 0.1 -0.2 -2.0 0.1
auxotrophy YNB Glucose -0.1 -0.0 -0.3 -0.5 -0.0
growth on ypd YPD -0.0 0.2 0.4 -1.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.1 -0.0 -1.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.1 -0.0 -0.9 0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.0 -0.4 0.2 -0.4
growth on oleic acid YNB Oleic Acid 0.2 0.1 -0.5 -0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.9 0.3 -1.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.2 -0.2 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 0.4 -0.2 -0.4 0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 0.1 0.2 -0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0 -0.1 0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.1 -0.3 0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 0.3 -0.9 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1 0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.8 0.4 -1.1 -0.0
growth on oleic acid YNB Glucose 0.1 0.4 -0.3 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.1 0.2 0.0 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.7 0.6 -0.7 0.0
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