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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4336: 12704 - K05863 SLC25A4S, ANT solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31, at 1937307 to 1938868
12704
mRNA_4337: 12705 - HMMPfam-Secretory lipase-PF03583,SUPERFAMILY--SSF53474, at 1940222 to 1941811
12705
mRNA_4338: 12706 - SUPERFAMILY--SSF53098, at 1942344 to 1943662
12706
mRNA_4339: 12707 - K17677 IRC3 ATP-dependent helicase IRC3, at 1943840 to 1947247
12707
mRNA_4340: 12708 - K01074 PPT palmitoyl-protein thioesterase, at 1947671 to 1949110
12708
Group
Condition
mRNA_4336
mRNA_4337
mRNA_4338
mRNA_4339
mRNA_4340
12704
12705
12706
12707
12708
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.7
0.1
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.2
0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
0.0
-0.3
auxotrophy
YNB Glucose
-0.0
-0.1
-0.1
-0.3
auxotrophy
Dropout Complete
-0.1
-0.1
0.1
-0.4
growth on ypd
YPD
-0.7
0.7
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.2
0.3
0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.3
0.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
-0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.3
0.0
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.5
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.4
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
0.2
-0.0
0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.2
-0.5
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.5
0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.4
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.3
0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.5
0.2
0.6
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