Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1916431 to 1918530 12695 mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1918797 to 1920453 12696 mRNA_4329: 12697 - KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1), at 1921131 to 1925118 12697 mRNA_4330: 12698 - K18738 HEK2, KHD1 heterogeneous nuclear rnp K-like protein 2, at 1925709 to 1927416 12698 mRNA_4331: 12699 - K15262 BCP1, BCCIP protein BCP1, at 1927638 to 1928975 12699
Group Condition mRNA_4327 mRNA_4328 mRNA_4329 mRNA_4330 mRNA_4331
12695
12696
12697
12698
12699
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -1.8   -0.9  
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.5   -1.4  
auxotrophy Dropout Complete -0.4 0.3   -1.7  
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0   -1.3  
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.7   -0.6  
auxotrophy YNB Glucose -0.3 0.2   -1.3  
growth on oleic acid YNB Oleic Acid -0.2 -0.3   -0.8  
growth on oleic acid YNB Glucose 0.0 -0.4   -0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1   -0.9  
growth on ricinoleic acid YNB Glucose -0.2 0.2   -1.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1   -0.8  
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.4   -0.6  
growth on ypd YPD 0.1 -0.2   -0.7  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.4   -0.7  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.6   -0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.4   0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.8   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 1.2   -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.7   0.3  
ypd buoyancy 40 hrs High Buoyancy -0.1 1.0   0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 1.9   0.4  
remove
mRNA_4327
plot		 remove
mRNA_4328
plot		 remove
mRNA_4329		 remove
mRNA_4330
plot		 remove
mRNA_4331
plot