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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4326: 12694 - Hypothetical Protein, at 1914892 to 1915200
12694
mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1916431 to 1918530
12695
mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1918797 to 1920453
12696
mRNA_4329: 12697 - KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1), at 1921131 to 1925118
12697
mRNA_4330: 12698 - K18738 HEK2, KHD1 heterogeneous nuclear rnp K-like protein 2, at 1925709 to 1927416
12698
Group
Condition
mRNA_4326
mRNA_4327
mRNA_4328
mRNA_4329
mRNA_4330
12694
12695
12696
12697
12698
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.0
-1.8
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.5
-1.4
auxotrophy
Dropout Complete
-0.2
-0.4
0.3
-1.7
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
-0.0
-1.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
-0.3
-0.8
auxotrophy
YNB Glucose
-0.2
-0.3
0.2
-1.3
growth on oleic acid
YNB Glucose
-0.4
0.0
-0.4
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.2
-0.1
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.3
-0.7
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.1
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.0
-0.4
-0.6
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
0.2
-1.1
growth on ypd
YPD
0.2
0.1
-0.2
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.2
0.4
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.1
0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
0.4
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.8
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.3
1.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.7
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
1.0
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.5
1.9
0.4
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