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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1900603 to 1903265
12689
mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1905474 to 1907958
12690
mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1908331 to 1909628
12691
mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1909910 to 1911534
12692
mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1912299 to 1914440
12693
Group
Condition
mRNA_4321
mRNA_4322
mRNA_4323
mRNA_4324
mRNA_4325
12689
12690
12691
12692
12693
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.3
-1.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.1
-0.1
-0.6
-0.3
growth on ypd
YPD
-0.2
-0.1
-0.7
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
0.0
0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.1
-0.5
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.0
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.6
0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.9
-0.1
-0.5
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.0
0.3
0.1
auxotrophy
Dropout Complete
0.8
0.1
-0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.5
0.1
-0.1
-0.2
auxotrophy
YNB Glucose
0.6
0.0
-0.4
0.1
growth on ricinoleic acid
YNB Glucose
0.6
0.0
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.6
-0.1
-0.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.8
0.0
0.3
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.1
0.3
0.0
-0.6
growth on oleic acid
YNB Oleic Acid
0.9
0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
1.6
0.9
-0.1
0.1
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