Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1900603 to 1903265 12689 mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1905474 to 1907958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1908331 to 1909628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1909910 to 1911534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1912299 to 1914440 12693
Group Condition mRNA_4321 mRNA_4322 mRNA_4323 mRNA_4324 mRNA_4325
12689
12690
12691
12692
12693
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -1.4 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 -0.1 -0.6 -0.3  
growth on ypd YPD -0.2 -0.1 -0.7 -0.8  
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 0.0 0.2 0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.1 -0.5 -0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0 -0.4 -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 0.0 0.0  
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.6 0.1 -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.1 0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 -0.1 -0.5 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.3 0.0 0.3 0.1  
auxotrophy Dropout Complete 0.8 0.1 -0.6 -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.5 0.1 -0.1 -0.2  
auxotrophy YNB Glucose 0.6 0.0 -0.4 0.1  
growth on ricinoleic acid YNB Glucose 0.6 0.0 -0.0 -0.2  
auxotrophy YNB Glucose 75mM Methionine 0.6 -0.1 -0.2 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.1 -0.1 -0.1  
growth on oleic acid YNB Glucose 0.8 0.0 0.3 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 0.3 0.0 -0.6  
growth on oleic acid YNB Oleic Acid 0.9 0.2 -0.2 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 1.6 0.9 -0.1 0.1  
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