Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4320: 12688 - K03255 TIF31, CLU1 protein TIF31, at 1895347 to 1900311 12688 mRNA_4321: 12689 - K14960 CXXC1, SPP1, CPS40 COMPASS component SPP1, at 1900603 to 1903265 12689 mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1905474 to 1907958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1908331 to 1909628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1909910 to 1911534 12692
Group Condition mRNA_4320 mRNA_4321 mRNA_4322 mRNA_4323 mRNA_4324
12688
12689
12690
12691
12692
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -1.1 -0.1 -0.6 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.4 -0.3 -1.4 -0.1
growth on ypd YPD 0.2 -0.2 -0.1 -0.7 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 0.0 0.2 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.1 0.0 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.5 -0.1 -0.5 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.4 -0.6 0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 1.1 0.3 0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.5 0.5 0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.1 0.1 0.0
growth on ricinoleic acid YNB Glucose -0.4 0.6 0.0 -0.0 -0.2
auxotrophy YNB Glucose -0.4 0.6 0.0 -0.4 0.1
auxotrophy Dropout Complete -0.1 0.8 0.1 -0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 0.6 -0.1 -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.0 0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.9 -0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.7 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.3 0.0 0.3 0.1
growth on oleic acid YNB Glucose -0.0 0.8 0.0 0.3 -0.5
growth on oleic acid YNB Oleic Acid -0.2 0.9 0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 1.6 0.9 -0.1 0.1
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