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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4291: 12659 - Hypothetical Protein, at 1815371 to 1816823
12659
mRNA_4292: 12660 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1817819 to 1819208
12660
mRNA_4293: 12661 - KOG1375 Beta tubulin, at 1820426 to 1822919
12661
mRNA_4294: 12662 - K08851 TP53RK, PRPK, BUD32 TP53 regulating kinase and related kinases, at 1823138 to 1824204
12662
mRNA_4295: 12663 - K15454 PUS9 tRNA pseudouridine synthase 9, at 1824409 to 1826962
12663
Group
Condition
mRNA_4291
mRNA_4292
mRNA_4293
mRNA_4294
mRNA_4295
12659
12660
12661
12662
12663
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-1.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
-2.0
0.2
auxotrophy
YNB Glucose
-0.4
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.6
-0.0
growth on ypd
YPD
-0.4
-0.5
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.5
-0.1
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
0.1
auxotrophy
Dropout Complete
-0.3
0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
-0.3
0.5
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
1.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.7
0.7
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