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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4287: 12655 - K14559 MPP10 U3 small nucleolar RNA-associated protein MPP10, at 1808511 to 1811471
12655
mRNA_4288: 12656 - Hypothetical Protein, at 1811601 to 1812350
12656
mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1812694 to 1814089
12657
mRNA_4290: 12658 - Hypothetical Protein, at 1814315 to 1814636
12658
mRNA_4291: 12659 - Hypothetical Protein, at 1815371 to 1816823
12659
Group
Condition
mRNA_4287
mRNA_4288
mRNA_4289
mRNA_4290
mRNA_4291
12655
12656
12657
12658
12659
ypd buoyancy
40 hrs No Buoyancy Separation
0.8
0.0
-2.7
0.7
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.8
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-1.2
0.2
-0.1
auxotrophy
YNB Glucose
0.5
-0.6
-0.2
-0.4
auxotrophy
Dropout Complete
0.4
-1.1
0.7
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.8
0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.4
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.4
0.4
0.2
ypd buoyancy
40 hrs High Buoyancy
0.8
0.1
-0.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.2
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.8
0.1
-0.4
growth on oleic acid
YNB Glucose
0.4
-0.3
0.5
-0.1
growth on oleic acid
YNB Oleic Acid
0.6
-0.1
0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.7
1.7
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.5
1.6
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
1.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
0.8
1.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.2
1.6
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
2.1
-0.1
growth on ypd
YPD
0.2
0.1
2.7
-0.4
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