Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4266: 12634 - BLAST sucrase/ferredoxin-like domain-containing protein [Rh..., at 1748531 to 1749378 12634 mRNA_4267: 12635 - K01581 E4.1.1.17, ODC1, speC, speF ornithine decarboxylase, at 1750251 to 1751902 12635 mRNA_4268: 12636 - K02921 RP-L37Ae, RPL37A large subunit ribosomal protein L37Ae, at 1752786 to 1753388 12636 mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1754378 to 1755256 12637 mRNA_4270: 12638 - Hypothetical Protein, at 1758369 to 1759007 12638
Group Condition mRNA_4266 mRNA_4267 mRNA_4268 mRNA_4269 mRNA_4270
12634
12635
12636
12637
12638
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     0.1 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     -0.8 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     -0.3 -0.7
growth on ricinoleic acid YNB Glucose 0.1     -0.2 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2     0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.2     0.2 -0.5
growth on ypd YPD -0.1     0.3 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3     -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.4     0.0 0.2
growth on oleic acid YNB Glucose 0.0     0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2     -0.8 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2     -0.5 1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2     -0.1 0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.5     -0.0 1.2
auxotrophy YNB Glucose 75mM Arginine 0.2     0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2     0.1 1.0
auxotrophy Dropout Complete 0.3     0.5 0.2
auxotrophy YNB Glucose 75mM Methionine 0.4     0.4 0.5
auxotrophy YNB Glucose 0.3     0.7 0.4
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