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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4266: 12634 - BLAST sucrase/ferredoxin-like domain-containing protein [Rh..., at 1748531 to 1749378
12634
mRNA_4267: 12635 - K01581 E4.1.1.17, ODC1, speC, speF ornithine decarboxylase, at 1750251 to 1751902
12635
mRNA_4268: 12636 - K02921 RP-L37Ae, RPL37A large subunit ribosomal protein L37Ae, at 1752786 to 1753388
12636
mRNA_4269: 12637 - K15634 gpmB probable phosphoglycerate mutase, at 1754378 to 1755256
12637
mRNA_4270: 12638 - Hypothetical Protein, at 1758369 to 1759007
12638
Group
Condition
mRNA_4266
mRNA_4267
mRNA_4268
mRNA_4269
mRNA_4270
12634
12635
12636
12637
12638
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
-1.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.8
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.3
-0.7
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
-0.4
growth on oleic acid
YNB Oleic Acid
-0.2
0.2
-0.5
growth on ypd
YPD
-0.1
0.3
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.0
0.2
growth on oleic acid
YNB Glucose
0.0
0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.8
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.5
1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.0
1.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.2
0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
1.0
auxotrophy
Dropout Complete
0.3
0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.4
0.5
auxotrophy
YNB Glucose
0.3
0.7
0.4
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