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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4263: 12631 - K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic, at 1741232 to 1743677
12631
mRNA_4264: 12632 - Hypothetical Protein, at 1744091 to 1745665
12632
mRNA_4265: 12633 - BLAST lytic polysaccharide monooxygenase [Cenococcum geophi..., at 1746192 to 1748005
12633
mRNA_4266: 12634 - BLAST sucrase/ferredoxin-like domain-containing protein [Rh..., at 1748531 to 1749378
12634
mRNA_4267: 12635 - K01581 E4.1.1.17, ODC1, speC, speF ornithine decarboxylase, at 1750251 to 1751902
12635
Group
Condition
mRNA_4263
mRNA_4264
mRNA_4265
mRNA_4266
mRNA_4267
12631
12632
12633
12634
12635
ypd buoyancy
40 hrs No Buoyancy Separation
-1.8
0.2
0.1
-0.5
growth on oleic acid
YNB Glucose
-1.8
0.4
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
-2.1
0.6
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.5
0.3
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.3
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.6
0.1
0.3
-0.4
growth on ypd
YPD
-0.4
0.2
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
0.4
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.2
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.7
0.0
-0.7
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.6
-0.2
0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
-0.1
0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.5
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.0
0.2
0.0
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.5
0.1
0.1
auxotrophy
Dropout Complete
0.5
0.6
-0.2
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.7
0.1
0.1
auxotrophy
YNB Glucose
0.7
0.5
-0.2
0.3
growth on ricinoleic acid
YNB Glucose
0.7
0.7
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.7
0.7
0.3
0.4
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