Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1731914 to 1736985 12628 mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1737818 to 1738734 12629 mRNA_4262: 12630 - KOG2688 Transcription-associated recombination protein - Thp1p, at 1738900 to 1741067 12630 mRNA_4263: 12631 - K10416 DYNC1LI, DNCLI dynein light intermediate chain 1, cytosolic, at 1741232 to 1743677 12631 mRNA_4264: 12632 - Hypothetical Protein, at 1744091 to 1745665 12632
Group Condition mRNA_4260 mRNA_4261 mRNA_4262 mRNA_4263 mRNA_4264
12628
12629
12630
12631
12632
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -1.2 0.3 -1.8 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 -1.3 0.7 0.0
growth on oleic acid YNB Oleic Acid 0.2 -0.2 -0.5 -2.1 0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.3 -0.8 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -1.1 -1.4 0.3 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.3 -0.3 -1.5 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.9 -0.2 0.0 -0.2
growth on oleic acid YNB Glucose 0.1 0.4 0.1 -1.8 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -1.3 -0.4 1.0 0.2
growth on ypd YPD -0.1 -0.1 0.1 -0.4 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.4 -0.8 -0.5 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.6 -0.9 -0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1 -0.4 0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.7 0.1 -0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 0.2 0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.2 0.4 -0.0 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.6 -0.5 0.4 0.7
auxotrophy YNB Glucose 75mM Methionine 0.2 0.4 0.2 0.7 0.7
auxotrophy Dropout Complete 0.3 0.6 0.4 0.5 0.6
growth on ricinoleic acid YNB Glucose 0.5 0.7 0.2 0.7 0.7
auxotrophy YNB Glucose 0.3 0.9 0.5 0.7 0.5
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