Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4257: 12625 - K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+), at 1725575 to 1726851 12625 mRNA_4258: 12626 - KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily), at 1727283 to 1728545 12626 mRNA_4259: 12627 - SUPERFAMILY--SSF51445, at 1729172 to 1731284 12627 mRNA_4260: 12628 - K11849 USP25_28, UBP2 ubiquitin carboxyl-terminal hydrolase 25/28, at 1731914 to 1736985 12628 mRNA_4261: 12629 - HMMPfam-NUDIX domain-PF00293,ProSitePatterns-Nudix box signature.-PS00893,ProSiteProfiles-Nudix hydrolase domain profile.-PS51462,SUPERFAMILY--SSF55811, at 1737818 to 1738734 12629
Group Condition mRNA_4257 mRNA_4258 mRNA_4259 mRNA_4260 mRNA_4261
12625
12626
12627
12628
12629
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -1.1   -0.6 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.3 -0.2   -0.3 -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.7   0.1 -1.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.4   -0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1   -0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 1.1   0.0 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.8 0.2   0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.4   0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5   0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.4   -0.2 0.1
growth on ypd YPD -0.2 -0.0   -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.8   0.3 0.6
ypd buoyancy 40 hrs High Buoyancy -0.6 0.2   -0.0 0.7
auxotrophy YNB Glucose 75mM Methionine -0.7 0.3   0.2 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.1   0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3   0.3 0.6
growth on ricinoleic acid YNB Glucose -0.3 -0.5   0.5 0.7
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.4   -0.1 0.3
auxotrophy Dropout Complete -0.6 0.3   0.3 0.6
growth on oleic acid YNB Glucose 0.3 0.2   0.1 0.4
auxotrophy YNB Glucose -0.5 0.4   0.3 0.9
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