Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1719227 to 1720870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1721312 to 1723112 12623 mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1723590 to 1725479 12624 mRNA_4257: 12625 - K00295 MTD1 methylenetetrahydrofolate dehydrogenase (NAD+), at 1725575 to 1726851 12625 mRNA_4258: 12626 - KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily), at 1727283 to 1728545 12626
Group Condition mRNA_4254 mRNA_4255 mRNA_4256 mRNA_4257 mRNA_4258
12622
12623
12624
12625
12626
facs on lipid accumulation Sorted Low BODIPY Gate 1.1 -0.4 -0.5 -0.7 -1.1
auxotrophy Dropout Complete -1.1 0.1 0.0 -0.6 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.0 -0.1 0.1 -1.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.3 0.2 -0.5 1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 0.6 0.4 -0.5 -0.8
growth on oleic acid YNB Oleic Acid -0.5 -0.0 0.2 -0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 -0.3 -0.6 0.2
auxotrophy YNB Glucose -0.8 -0.0 0.2 -0.5 0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 0.3 0.1 -0.8 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.3 0.1 -1.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.4 0.3 -0.6 -0.7
growth on oleic acid YNB Glucose -0.8 -0.0 0.2 0.3 0.2
growth on ricinoleic acid YNB Glucose -0.1 0.5 0.3 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 0.4 0.3 -0.7 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 0.0 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.0 0.0 0.1 -0.4
growth on ypd YPD 1.1 -0.4 -0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.2 0.3 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.3 0.2 -0.7 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.5 0.4 -0.3 -0.3
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