Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1715834 to 1717453 12620 mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1718073 to 1718994 12621 mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1719227 to 1720870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1721312 to 1723112 12623 mRNA_4256: 12624 - HMMPfam-Putative serine esterase (DUF676)-PF05057,SUPERFAMILY--SSF53474, at 1723590 to 1725479 12624
Group Condition mRNA_4252 mRNA_4253 mRNA_4254 mRNA_4255 mRNA_4256
12620
12621
12622
12623
12624
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -1.3 -0.3 0.2
growth on oleic acid YNB Glucose -0.2   -0.8 -0.0 0.2
auxotrophy Dropout Complete 0.4   -1.1 0.1 0.0
auxotrophy YNB Glucose 0.1   -0.8 -0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.2 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6   0.3 0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.2   -0.5 -0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7   0.4 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3 -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   1.1 -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.3   0.1 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.1   -0.4 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.3 0.4 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.5 0.6 0.4
growth on ypd YPD 0.1   1.1 -0.4 -0.3
growth on ricinoleic acid YNB Glucose 0.3   -0.1 0.5 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   0.4 0.5 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.7 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.6 0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   0.6 0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6   0.3 0.4 0.3
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