Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4251: 12619 - K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase, at 1714750 to 1715768 12619 mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1715834 to 1717453 12620 mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1718073 to 1718994 12621 mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1719227 to 1720870 12622 mRNA_4255: 12623 - HMMPfam-Dioxygenase-PF00775,SUPERFAMILY--SSF49482, at 1721312 to 1723112 12623
Group Condition mRNA_4251 mRNA_4252 mRNA_4253 mRNA_4254 mRNA_4255
12619
12620
12621
12622
12623
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1   -1.3 -0.3
growth on oleic acid YNB Glucose -0.1 -0.2   -0.8 -0.0
auxotrophy Dropout Complete -0.1 0.4   -1.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1   -0.3 -0.1
auxotrophy YNB Glucose 0.2 0.1   -0.8 -0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.2   -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2   -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.7   0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.6   0.3 0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1   -0.4 0.3
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1   -0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 0.3   0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3   1.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.0   -0.5 0.6
growth on ricinoleic acid YNB Glucose 0.0 0.3   -0.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.3   0.6 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.0   0.4 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2   0.6 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.6   0.3 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2   0.7 0.3
growth on ypd YPD 0.6 0.1   1.1 -0.4
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