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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1711024 to 1714296
12618
mRNA_4251: 12619 - K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase, at 1714750 to 1715768
12619
mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1715834 to 1717453
12620
mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1718073 to 1718994
12621
mRNA_4254: 12622 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF75011, at 1719227 to 1720870
12622
Group
Condition
mRNA_4250
mRNA_4251
mRNA_4252
mRNA_4253
mRNA_4254
12618
12619
12620
12621
12622
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
-1.3
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.8
auxotrophy
Dropout Complete
-0.1
0.4
-1.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose
0.2
0.1
-0.8
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.6
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.7
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.1
-0.3
growth on ricinoleic acid
YNB Glucose
0.0
0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.0
0.4
ypd buoyancy
40 hrs High Buoyancy
0.0
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.3
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.6
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.3
1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.7
growth on ypd
YPD
0.6
0.1
1.1
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