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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4249: 12617 - K10436 MAPRE microtubule-associated protein, RP/EB family, at 1709275 to 1710811
12617
mRNA_4250: 12618 - K08956 AFG3 AFG3 family protein, at 1711024 to 1714296
12618
mRNA_4251: 12619 - K07560 dtd, DTD1 D-tyrosyl-tRNA(Tyr) deacylase, at 1714750 to 1715768
12619
mRNA_4252: 12620 - HMMPfam-Carboxymuconolactone decarboxylase family-PF02627,HMMPfam-Alpha/beta hydrolase family-PF12697,PRINTS-Alpha/beta hydrolase fold signature-PR00111,SUPERFAMILY--SSF53474,SUPERFAMILY--SSF69118, at 1715834 to 1717453
12620
mRNA_4253: 12621 - BLAST Dimeric alpha-beta barrel [Ceraceosorus bombacis], at 1718073 to 1718994
12621
Group
Condition
mRNA_4249
mRNA_4250
mRNA_4251
mRNA_4252
mRNA_4253
12617
12618
12619
12620
12621
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.0
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.0
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
0.2
growth on oleic acid
YNB Glucose
0.5
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.0
0.0
growth on oleic acid
YNB Oleic Acid
0.2
0.1
-0.2
auxotrophy
YNB Glucose
-0.0
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
0.1
auxotrophy
Dropout Complete
-0.0
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.2
0.3
growth on ricinoleic acid
YNB Glucose
0.1
0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.3
-0.0
growth on ypd
YPD
-0.0
0.6
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
-0.2
0.6
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