Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4235: 12603 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1682242 to 1685142 12603 mRNA_4236: 12604 - HMMPfam-pinin/SDK/memA/ protein conserved region-PF04696, at 1685363 to 1686839 12604 mRNA_4237: 12605 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 1687514 to 1688995 12605 mRNA_4238: 12606 - KOG1105 Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1, at 1689549 to 1691062 12606 mRNA_4239: 12607 - Hypothetical Protein, at 1691409 to 1692539 12607
Group Condition mRNA_4235 mRNA_4236 mRNA_4237 mRNA_4238 mRNA_4239
12603
12604
12605
12606
12607
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.1 -1.3 -0.4 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -1.1 -1.0 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -2.0 0.7 0.1 0.3
auxotrophy Dropout Complete -0.2 -0.7 0.2 -0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.5 -1.1 0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 -0.0 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -0.2 -0.0 -0.1
growth on oleic acid YNB Glucose 0.1 0.6 -1.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.7 -0.4 0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.0 0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.3 0.3 -0.0 -0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.1 1.0 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 0.3 0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 0.3 0.1 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.4 0.3 0.2 -0.1
growth on oleic acid YNB Oleic Acid 0.0 0.7 0.3 0.2 -0.1
auxotrophy YNB Glucose -0.1 -0.2 1.1 0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 1.0 0.5 -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 2.4 0.3 0.2
growth on ypd YPD -0.0 -0.4 2.2 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3 1.4 0.4 0.2
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