Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4231: 12599 - KOG4476 Gluconate transport-inducing protein, at 1669682 to 1672278 12599 mRNA_4232: 12600 - K14832 MAK21, NOC1, CEBPZ ribosome biogenesis protein MAK21, at 1673939 to 1677855 12600 mRNA_4233: 12601 - K11096 SNRPD2, SMD2 small nuclear ribonucleoprotein D2, at 1678008 to 1678995 12601 mRNA_4234: 12602 - SUPERFAMILY--SSF56112, at 1679173 to 1681802 12602 mRNA_4235: 12603 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1682242 to 1685142 12603
Group Condition mRNA_4231 mRNA_4232 mRNA_4233 mRNA_4234 mRNA_4235
12599
12600
12601
12602
12603
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     -0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.0     -0.4 0.1
growth on oleic acid YNB Oleic Acid 0.1     -0.4 0.0
auxotrophy YNB Glucose 0.1     -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2     -0.4 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2     -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0     -0.0 -0.1
auxotrophy Dropout Complete 0.2     -0.2 -0.2
growth on oleic acid YNB Glucose 0.0     -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0     0.2 -0.2
growth on ypd YPD 0.0     -0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2     -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     -0.0 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0     0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2     0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3     0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1     0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.0     0.0 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.2     0.3 0.4
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