Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1655813 to 1659134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1659342 to 1664294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1664349 to 1666570 12596 mRNA_4229: 12597 - K03145 TFIIS transcription elongation factor S-II, at 1666724 to 1668318 12597 mRNA_4230: 12598 - KOG1659 Class 2 transcription repressor NC2, alpha subunit (DRAP1), at 1668742 to 1669106 12598
Group Condition mRNA_4226 mRNA_4227 mRNA_4228 mRNA_4229 mRNA_4230
12594
12595
12596
12597
12598
growth on ricinoleic acid YNB Ricinoleic Acid -3.3 0.0      
ypd buoyancy 40 hrs Low Buoyancy -3.2 0.2      
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 -0.1      
growth on oleic acid YNB Oleic Acid -1.5 0.0      
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.2      
growth on ypd YPD -0.5 0.0      
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.0      
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0      
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.1      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.1      
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1      
growth on oleic acid YNB Glucose 0.2 -0.2      
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.0      
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1      
growth on ricinoleic acid YNB Glucose 0.2 0.1      
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2      
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1      
auxotrophy Dropout Complete 0.4 -0.0      
auxotrophy YNB Glucose 0.4 0.0      
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.1      
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