Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1654260 to 1655493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1655813 to 1659134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1659342 to 1664294 12595 mRNA_4228: 12596 - K00995 pgsA, PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1664349 to 1666570 12596 mRNA_4229: 12597 - K03145 TFIIS transcription elongation factor S-II, at 1666724 to 1668318 12597
Group Condition mRNA_4225 mRNA_4226 mRNA_4227 mRNA_4228 mRNA_4229
12593
12594
12595
12596
12597
ypd buoyancy 40 hrs Low Buoyancy -0.3 -3.2 0.2    
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -3.3 0.0    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -1.8 -0.1    
growth on oleic acid YNB Oleic Acid 0.1 -1.5 0.0    
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.2    
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 -0.1    
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 0.0    
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 -0.0    
growth on ypd YPD 0.2 -0.5 0.0    
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.5 0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.0 0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.4 0.1    
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -0.1    
auxotrophy YNB Glucose -0.1 0.4 0.0    
auxotrophy Dropout Complete 0.0 0.4 -0.0    
growth on oleic acid YNB Glucose 0.4 0.2 -0.2    
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.2    
growth on ricinoleic acid YNB Glucose 0.4 0.2 0.1    
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3 0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.1 0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.5 0.1    
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