Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1648878 to 1650600 12591 mRNA_4224: 12592 - Hypothetical Protein, at 1650679 to 1653904 12592 mRNA_4225: 12593 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 1654260 to 1655493 12593 mRNA_4226: 12594 - K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme, at 1655813 to 1659134 12594 mRNA_4227: 12595 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF48452, at 1659342 to 1664294 12595
Group Condition mRNA_4223 mRNA_4224 mRNA_4225 mRNA_4226 mRNA_4227
12591
12592
12593
12594
12595
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.3 -3.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.0 -0.1 -3.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 0.2 -1.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.3 -0.5 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.5 0.1 -0.5 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.3 0.1 -1.5 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.3 -0.2 -0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.2 -0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.3 -0.2 -0.5 0.0
growth on ypd YPD 0.4 -0.4 0.2 -0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.0 -0.2 0.0 0.0
auxotrophy Dropout Complete -0.2 -0.3 0.0 0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 0.3 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 -0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.4 0.5 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.3 0.4 0.2 0.1
auxotrophy YNB Glucose -0.1 -0.1 -0.1 0.4 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0 0.3 -0.4 0.1
growth on oleic acid YNB Glucose -0.1 -0.1 0.4 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 0.3 0.5 0.1
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