Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1642992 to 1644310 12587 mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1644542 to 1645935 12588 mRNA_4221: 12589 - HMMPfam-Sodium/hydrogen exchanger family-PF00999, at 1646104 to 1647809 12589 mRNA_4222: 12590 - K17969 FIS1, TTC11, MDV2 mitochondrial fission 1 protein, at 1647878 to 1648825 12590 mRNA_4223: 12591 - KOG3957 Predicted L-carnitine dehydratase/alpha-methylacyl-CoA racemase, at 1648878 to 1650600 12591
Group Condition mRNA_4219 mRNA_4220 mRNA_4221 mRNA_4222 mRNA_4223
12587
12588
12589
12590
12591
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -3.5 -0.2 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.0 -0.0 -1.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.8 -0.1 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -1.3 0.3 -0.9 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.7 -0.4 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.5 0.3 -1.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.7 0.2 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 0.8 -0.4 -0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.2 -0.3 -0.2 0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.1 -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.1 0.2 -0.5 0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.3 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.7 0.0 -0.0 0.1
growth on oleic acid YNB Glucose 0.2 0.3 -0.1 0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.6 -0.0 0.0 0.0
auxotrophy YNB Glucose 75mM Arginine 0.3 0.2 0.2 -0.0 -0.2
auxotrophy YNB Glucose 0.0 0.3 0.0 0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.3 0.2 -0.2 0.1 0.1
auxotrophy Dropout Complete 0.2 0.7 -0.2 0.3 -0.2
growth on ypd YPD 0.5 -0.2 0.5 0.1 0.4
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