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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4216: 12584 - K13123 GPATCH1 G patch domain-containing protein 1, at 1632633 to 1635917
12584
mRNA_4217: 12585 - K14830 MAK11, PAK1IP1 protein MAK11, at 1636236 to 1637979
12585
mRNA_4218: 12586 - K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3, at 1638497 to 1642867
12586
mRNA_4219: 12587 - HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979, at 1642992 to 1644310
12587
mRNA_4220: 12588 - K19932 NCS1 neuronal calcium sensor 1, at 1644542 to 1645935
12588
Group
Condition
mRNA_4216
mRNA_4217
mRNA_4218
mRNA_4219
mRNA_4220
12584
12585
12586
12587
12588
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.4
0.3
-3.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
-0.9
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.4
0.3
-1.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.2
-0.1
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
0.2
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
-0.6
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.3
-0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.2
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
0.2
-0.3
auxotrophy
YNB Glucose
-0.4
0.2
0.0
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.1
0.3
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
0.8
0.3
-0.5
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.3
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
-0.5
0.7
growth on oleic acid
YNB Glucose
-0.1
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
-0.2
0.6
auxotrophy
Dropout Complete
-0.3
0.1
0.2
0.7
growth on ypd
YPD
0.4
0.1
0.5
-0.2
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