Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4214: 12582 - Hypothetical Protein, at 1627604 to 1628234 12582 mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1628939 to 1632484 12583 mRNA_4216: 12584 - K13123 GPATCH1 G patch domain-containing protein 1, at 1632633 to 1635917 12584 mRNA_4217: 12585 - K14830 MAK11, PAK1IP1 protein MAK11, at 1636236 to 1637979 12585 mRNA_4218: 12586 - K17491 SMEK, PPP4R3 protein phosphatase 4 regulatory subunit 3, at 1638497 to 1642867 12586
Group Condition mRNA_4214 mRNA_4215 mRNA_4216 mRNA_4217 mRNA_4218
12582
12583
12584
12585
12586
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.1 -0.5   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.4   -0.2
auxotrophy Dropout Complete -0.4 -0.1 -0.3   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 -0.0   -0.3
auxotrophy YNB Glucose -0.3 -0.0 -0.4   0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 -0.3   -0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.2   -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 -0.1   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.1 0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 0.1   -0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.1 -0.1   -0.2
growth on oleic acid YNB Glucose -0.0 0.0 -0.1   0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.1 -0.0   -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 -0.4   0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.1   -0.0
growth on ricinoleic acid YNB Glucose 0.1 -0.2 -0.1   0.3
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0 -0.3   0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.4 0.2   -0.1
growth on ypd YPD 0.2 0.0 0.4   0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.3 -0.5   0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 0.4   0.1
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