Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579 mRNA_4212: 12580 - KOG1968 Replication factor C, subunit RFC1 (large subunit), at 1623456 to 1625668 12580 mRNA_4213: 12581 - K01673 cynT, can carbonic anhydrase, at 1625802 to 1627146 12581 mRNA_4214: 12582 - Hypothetical Protein, at 1627604 to 1628234 12582 mRNA_4215: 12583 - HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350, at 1628939 to 1632484 12583
Group Condition mRNA_4211 mRNA_4212 mRNA_4213 mRNA_4214 mRNA_4215
12579
12580
12581
12582
12583
ypd buoyancy 40 hrs No Buoyancy Separation -1.8 -0.4 -2.3 0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 0.3 -1.6 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 0.5 -1.7 0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 -0.9 -0.7 0.1
ypd buoyancy 40 hrs High Buoyancy -2.1 0.1 0.5 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.9 0.2 -0.4 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 0.2 -0.4 -0.0
auxotrophy Dropout Complete -1.4 0.2 0.9 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -0.3 0.2 0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 -0.2 -0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 -0.5 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.3 -0.4 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.3 0.4 -0.1 0.2 -0.1
growth on oleic acid YNB Glucose -0.2 0.1 0.4 -0.0 0.0
growth on ypd YPD 0.1 0.1 -0.1 0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.2 0.5 0.2 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.0 0.7 0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.1 0.7 0.3 0.0
auxotrophy YNB Glucose -0.6 0.1 1.5 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.1 2.1 0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 1.6 -0.1 -0.0
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