Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1611743 to 1613207 12575 mRNA_4208: 12576 - K17919 SNX4 sorting nexin-4, at 1613612 to 1615514 12576 mRNA_4209: 12577 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 1615699 to 1618403 12577 mRNA_4210: 12578 - K19985 EXOC6, SEC15 exocyst complex component 6, at 1618796 to 1621938 12578 mRNA_4211: 12579 - Hypothetical Protein, at 1622119 to 1623170 12579
Group Condition mRNA_4207 mRNA_4208 mRNA_4209 mRNA_4210 mRNA_4211
12575
12576
12577
12578
12579
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -1.8 -0.1 -0.7 -1.3
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 0.1 -0.3 -2.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.2 -0.1 -1.2 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.4 0.1 -0.3 -1.8
auxotrophy Dropout Complete -0.6 -0.3 0.7 -0.1 -1.4
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.5 -0.0 -0.8 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -1.0 0.5 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.7 0.3 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.8 0.2 -0.8 0.3
auxotrophy YNB Glucose -0.0 -0.6 0.5 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.3 0.1 -0.7 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 0.0 0.4 -1.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 0.1 0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 0.1 -0.5 0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.4 0.5 -0.4 -0.3
growth on oleic acid YNB Glucose 0.0 -0.2 0.2 -0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.2 0.3 0.0 -0.0 -0.9
growth on oleic acid YNB Oleic Acid 0.2 -0.0 0.2 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.0 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 0.2 0.1 -0.4
growth on ypd YPD -0.0 0.2 0.2 -0.2 0.1
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