Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4203: 12571 - K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2, at 1601510 to 1605241 12571 mRNA_4204: 12572 - K15292 STXBP1, MUNC18-1 syntaxin-binding protein 1, at 1605498 to 1608617 12572 mRNA_4205: 12573 - K09276 YBX1, NSEP1 Y-box-binding protein 1, at 1609295 to 1611072 12573 mRNA_4206: 12574 - Hypothetical Protein, at 1611148 to 1611771 12574 mRNA_4207: 12575 - BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308], at 1611743 to 1613207 12575
Group Condition mRNA_4203 mRNA_4204 mRNA_4205 mRNA_4206 mRNA_4207
12571
12572
12573
12574
12575
growth on ricinoleic acid YNB Ricinoleic Acid -3.3   0.1 0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -3.2   0.2 0.1 0.4
growth on ricinoleic acid YNB Glucose -2.7   0.4 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7   -0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9   -0.5 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1   0.0 -0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.0 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.0 -0.1 -0.4
auxotrophy Dropout Complete -0.7   0.7 0.0 -0.6
growth on oleic acid YNB Glucose -0.8   0.3 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   -0.0 0.2 -0.2
auxotrophy YNB Glucose -1.4   0.9 0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5   0.5 0.1 -0.1
growth on ypd YPD 0.1   -0.5 0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5   0.2 0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.2 0.0 0.0
growth on oleic acid YNB Oleic Acid -0.2   0.3 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.7   0.6 0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   -0.1 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.3 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   -0.1 0.4 -0.1
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