Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4198: 12566 - K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit, at 1590487 to 1592266 12566 mRNA_4199: 12567 - KOG1303 Amino acid transporters, at 1592651 to 1594788 12567 mRNA_4200: 12568 - Hypothetical Protein, at 1595290 to 1595787 12568 mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1596193 to 1596692 12569 mRNA_4202: 12570 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 1597086 to 1599409 12570
Group Condition mRNA_4198 mRNA_4199 mRNA_4200 mRNA_4201 mRNA_4202
12566
12567
12568
12569
12570
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 -0.0   -0.9
growth on oleic acid YNB Oleic Acid -0.6 -0.1 0.3   -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 0.4   -0.4
auxotrophy Dropout Complete -0.5 -0.1 0.1   -0.0
growth on oleic acid YNB Glucose -0.3 -0.3 0.3   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.1 0.2   -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.0 -0.0   -0.1
auxotrophy YNB Glucose -0.2 -0.1 0.1   0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2 0.0   -0.1
growth on ricinoleic acid YNB Glucose 0.1 0.1 -0.1   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.0 0.2   -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.1   0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 0.2   0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 0.2 0.3   0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.1   0.2
growth on ypd YPD 0.4 0.0 -0.0   0.1
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.0 -0.0   0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.0 0.2   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 0.4 -0.4   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.3 0.1   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 0.2   0.4
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