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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4193: 12561 - Hypothetical Protein, at 1580428 to 1584449
12561
mRNA_4194: 12562 - K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase, at 1584696 to 1585623
12562
mRNA_4195: 12563 - HMMPfam-Protein of unknown function (DUF2962)-PF11176, at 1585796 to 1586681
12563
mRNA_4196: 12564 - K12343 SRD5A1 3-oxo-5-alpha-steroid 4-dehydrogenase 1, at 1586838 to 1587953
12564
mRNA_4197: 12565 - K00512 CYP17A steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase, at 1588332 to 1590437
12565
Group
Condition
mRNA_4193
mRNA_4194
mRNA_4195
mRNA_4196
mRNA_4197
12561
12562
12563
12564
12565
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.6
-0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.6
-0.4
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.3
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.1
-0.2
-0.7
auxotrophy
YNB Glucose
-0.0
-0.3
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.6
-0.3
0.4
growth on oleic acid
YNB Glucose
-0.1
-0.2
0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-1.1
-0.7
0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.0
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
-0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
0.1
0.1
auxotrophy
Dropout Complete
-0.1
-0.1
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.3
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.5
-0.2
0.8
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.5
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.2
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.1
0.2
-0.1
growth on ypd
YPD
0.1
0.5
0.2
-0.1
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