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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4192: 12560 - K04797 pfdA, PFDN5 prefoldin alpha subunit, at 1579448 to 1580118
12560
mRNA_4193: 12561 - Hypothetical Protein, at 1580428 to 1584449
12561
mRNA_4194: 12562 - K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase, at 1584696 to 1585623
12562
mRNA_4195: 12563 - HMMPfam-Protein of unknown function (DUF2962)-PF11176, at 1585796 to 1586681
12563
mRNA_4196: 12564 - K12343 SRD5A1 3-oxo-5-alpha-steroid 4-dehydrogenase 1, at 1586838 to 1587953
12564
Group
Condition
mRNA_4192
mRNA_4193
mRNA_4194
mRNA_4195
mRNA_4196
12560
12561
12562
12563
12564
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
-0.0
-0.2
0.1
auxotrophy
YNB Glucose
-0.9
-0.0
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
-0.6
-0.5
growth on ricinoleic acid
YNB Glucose
-0.9
-0.1
-0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.6
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.2
0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.1
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.5
-0.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.9
0.5
-1.1
-0.7
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
-0.5
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
0.3
-0.1
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
-0.2
0.6
auxotrophy
Dropout Complete
0.3
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.2
0.1
0.1
-0.2
growth on ypd
YPD
0.5
0.1
0.5
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.9
0.2
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
2.1
0.0
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
2.3
0.0
0.5
-0.2
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