Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_4190: 12558 - Hypothetical Protein, at 1575041 to 1575964 12558 mRNA_4191: 12559 - HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781, at 1577010 to 1579239 12559 mRNA_4192: 12560 - K04797 pfdA, PFDN5 prefoldin alpha subunit, at 1579448 to 1580118 12560 mRNA_4193: 12561 - Hypothetical Protein, at 1580428 to 1584449 12561 mRNA_4194: 12562 - K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase, at 1584696 to 1585623 12562
Group Condition mRNA_4190 mRNA_4191 mRNA_4192 mRNA_4193 mRNA_4194
12558
12559
12560
12561
12562
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.1 -2.0 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.9 0.9 0.5 -1.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -0.9 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.5 -0.3 -0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.1 0.5 -0.2 0.5 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -0.2 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.0 0.2 -0.2 0.2 0.2
auxotrophy YNB Glucose 0.6 0.0 -0.9 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.2 0.2 -0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.3 0.1 -0.5
growth on oleic acid YNB Oleic Acid 0.5 -0.1 -0.2 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.4 0.5 -0.2 0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2 0.3 -0.1 -0.1
growth on oleic acid YNB Glucose 0.1 0.2 0.3 -0.1 -0.2
auxotrophy Dropout Complete 0.2 0.3 0.3 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 1.0 0.1 0.2 0.1 -0.3
growth on ypd YPD -0.3 0.3 0.5 0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.0 1.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.0 0.9 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 2.1 0.0 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 2.3 0.0 0.5
remove
mRNA_4190
plot
remove
mRNA_4191
plot
remove
mRNA_4192
remove
mRNA_4193
plot
remove
mRNA_4194
plot