Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1566413 to 1568898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1569066 to 1571020 12556 mRNA_4189: 12557 - Hypothetical Protein, at 1571432 to 1574972 12557 mRNA_4190: 12558 - Hypothetical Protein, at 1575041 to 1575964 12558 mRNA_4191: 12559 - HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781, at 1577010 to 1579239 12559
Group Condition mRNA_4187 mRNA_4188 mRNA_4189 mRNA_4190 mRNA_4191
12555
12556
12557
12558
12559
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.8   -1.2 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.4   -0.7 -0.1
growth on oleic acid YNB Oleic Acid -1.5 -0.1   0.5 -0.1
growth on oleic acid YNB Glucose -1.1 -0.4   0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 0.2   -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1   -1.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 0.5   -0.1 -0.5
growth on ypd YPD -0.4 -0.2   -0.3 0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.1   -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.3   -1.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.7   0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.3   -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1   0.3 0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.4   0.4 0.5
auxotrophy YNB Glucose -0.3 -0.3   0.6 0.0
auxotrophy Dropout Complete -0.4 -0.2   0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1   0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2   0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1   0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1   1.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.1   0.8 0.0
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