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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4186: 12554 - KOG2806 Chitinase, at 1564500 to 1566078
12554
mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1566413 to 1568898
12555
mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1569066 to 1571020
12556
mRNA_4189: 12557 - Hypothetical Protein, at 1571432 to 1574972
12557
mRNA_4190: 12558 - Hypothetical Protein, at 1575041 to 1575964
12558
Group
Condition
mRNA_4186
mRNA_4187
mRNA_4188
mRNA_4189
mRNA_4190
12554
12555
12556
12557
12558
facs on lipid accumulation
Sorted High BODIPY Gate
-1.8
-0.3
0.3
-1.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
-0.0
-0.4
-0.7
growth on oleic acid
YNB Oleic Acid
-0.9
-1.5
-0.1
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
0.1
-0.1
-1.0
growth on oleic acid
YNB Glucose
-0.4
-1.1
-0.4
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.8
-0.8
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.8
0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.7
0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
-0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.4
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.4
0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.0
-0.7
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.5
-0.4
0.4
growth on ricinoleic acid
YNB Glucose
0.2
-0.2
-0.1
-0.2
auxotrophy
Dropout Complete
0.3
-0.4
-0.2
0.2
growth on ypd
YPD
1.2
-0.4
-0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.4
-0.2
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.4
0.1
0.8
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.3
0.1
0.0
auxotrophy
YNB Glucose
0.6
-0.3
-0.3
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.6
-0.1
1.0
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