Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4184: 12552 - K20989 DUR3 urea-proton symporter, at 1558379 to 1561248 12552 mRNA_4185: 12553 - KOG1212 Amidases, at 1562094 to 1563941 12553 mRNA_4186: 12554 - KOG2806 Chitinase, at 1564500 to 1566078 12554 mRNA_4187: 12555 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 1566413 to 1568898 12555 mRNA_4188: 12556 - KOG4372 Predicted alpha/beta hydrolase, at 1569066 to 1571020 12556
Group Condition mRNA_4184 mRNA_4185 mRNA_4186 mRNA_4187 mRNA_4188
12552
12553
12554
12555
12556
growth on oleic acid YNB Oleic Acid -0.3 0.2 -0.9 -1.5 -0.1
growth on oleic acid YNB Glucose -0.3 -0.0 -0.4 -1.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -1.8 -0.3 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.0 -1.4 -0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 0.1 -0.5 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 -1.1 -0.7 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.3 -0.6 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.4 -0.6 -0.8 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.3 -0.9 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.1 0.0 -0.7
auxotrophy Dropout Complete -0.3 -0.2 0.3 -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 -1.0 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.4 -0.5 0.8 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 0.5 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 0.0 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2 -0.4 -0.4 0.3
growth on ricinoleic acid YNB Glucose -0.2 0.4 0.2 -0.2 -0.1
auxotrophy YNB Glucose -0.0 0.1 0.6 -0.3 -0.3
growth on ypd YPD -0.2 0.0 1.2 -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.1 0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.3 0.2 0.3 0.1
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