Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4175: 12543 - K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, at 1541206 to 1541936 12543 mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1542041 to 1542823 12544 mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1543096 to 1544844 12545 mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1545010 to 1546616 12546 mRNA_4179: 12547 - KOG0429 Ubiquitin-conjugating enzyme-related protein Ft1, involved in programmed cell death, at 1547338 to 1548132 12547
Group Condition mRNA_4175 mRNA_4176 mRNA_4177 mRNA_4178 mRNA_4179
12543
12544
12545
12546
12547
growth on ricinoleic acid YNB Methylricinoleic Acid -2.8     -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.9     -0.4 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3     -0.3 -1.8
ypd buoyancy 40 hrs Low Buoyancy -1.3     -0.5 -0.1
growth on ricinoleic acid YNB Glucose -1.0     -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.3     -0.0 0.2
auxotrophy Dropout Complete -0.3     -0.1 -0.3
auxotrophy YNB Glucose -0.3     -0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.8     -0.1 0.1
growth on ypd YPD -0.1     -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2     -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6     -0.5 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.1     0.1 -0.5
growth on oleic acid YNB Glucose -0.3     0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.0     0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0     0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0     -0.2 0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1     0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.1     0.0 0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1     0.5 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.7     -0.3 0.7
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