Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1535765 to 1540719 12542 mRNA_4175: 12543 - K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, at 1541206 to 1541936 12543 mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1542041 to 1542823 12544 mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1543096 to 1544844 12545 mRNA_4178: 12546 - KOG1337 N-methyltransferase, at 1545010 to 1546616 12546
Group Condition mRNA_4174 mRNA_4175 mRNA_4176 mRNA_4177 mRNA_4178
12542
12543
12544
12545
12546
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -2.8     -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -2.9     -0.4
growth on ricinoleic acid YNB Glucose -0.6 -1.0     -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.3     -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -1.3     -0.0
auxotrophy YNB Glucose -0.5 -0.3     -0.2
growth on oleic acid YNB Glucose -0.4 -0.3     0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.8     -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.3     -0.3
growth on ypd YPD -0.3 -0.1     -0.2
auxotrophy Dropout Complete -0.0 -0.3     -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2     -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.0     -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1     0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1     0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 0.0     0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.7     -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1     0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1     0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.6     -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.0     0.3
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