Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4173: 12541 - KOG2348 Urea transporter, at 1533332 to 1534654 12541 mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1535765 to 1540719 12542 mRNA_4175: 12543 - K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, at 1541206 to 1541936 12543 mRNA_4176: 12544 - KOG4093 Uncharacterized conserved protein, at 1542041 to 1542823 12544 mRNA_4177: 12545 - K15356 VRG4, GONST1 GDP-mannose transporter, at 1543096 to 1544844 12545
Group Condition mRNA_4173 mRNA_4174 mRNA_4175 mRNA_4176 mRNA_4177
12541
12542
12543
12544
12545
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -1.1 -2.8    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.6 -2.9    
growth on ricinoleic acid YNB Glucose -0.3 -0.6 -1.0    
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -1.3    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.2 -1.3    
growth on oleic acid YNB Oleic Acid -0.7 0.1 -0.8    
growth on oleic acid YNB Glucose -0.5 -0.4 -0.3    
auxotrophy YNB Glucose -0.4 -0.5 -0.3    
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.2 -0.2    
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.2 0.0    
auxotrophy Dropout Complete -0.4 -0.0 -0.3    
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4 -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 -0.3    
growth on ypd YPD 0.1 -0.3 -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 0.0    
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 -0.1    
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 -0.0    
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.1 -0.1    
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.3 0.7    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.2 0.6    
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