Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1524974 to 1527080 12538 mRNA_4171: 12539 - KOG2806 Chitinase, at 1528014 to 1529581 12539 mRNA_4172: 12540 - KOG1212 Amidases, at 1530143 to 1531631 12540 mRNA_4173: 12541 - KOG2348 Urea transporter, at 1533332 to 1534654 12541 mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1535765 to 1540719 12542
Group Condition mRNA_4170 mRNA_4171 mRNA_4172 mRNA_4173 mRNA_4174
12538
12539
12540
12541
12542
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.6   -0.4 -1.1
auxotrophy YNB Glucose 0.1 -0.6   -0.4 -0.5
growth on ricinoleic acid YNB Glucose 0.0 -0.6   -0.3 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.4   -0.7 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.5   -0.6 -0.2
growth on oleic acid YNB Glucose -0.1 -0.1   -0.5 -0.4
auxotrophy Dropout Complete 0.0 -0.5   -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.5   -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1   -0.2 -0.6
growth on oleic acid YNB Oleic Acid 0.1 -0.1   -0.7 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1   -0.1 0.1
growth on ypd YPD 0.1 -0.2   0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4   0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1   0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.2   0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2   0.5 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.4   -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1   -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.9   -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.7   -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.6   0.4 -0.3
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