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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1524974 to 1527080
12538
mRNA_4171: 12539 - KOG2806 Chitinase, at 1528014 to 1529581
12539
mRNA_4172: 12540 - KOG1212 Amidases, at 1530143 to 1531631
12540
mRNA_4173: 12541 - KOG2348 Urea transporter, at 1533332 to 1534654
12541
mRNA_4174: 12542 - KOG4305 RhoGEF GTPase, at 1535765 to 1540719
12542
Group
Condition
mRNA_4170
mRNA_4171
mRNA_4172
mRNA_4173
mRNA_4174
12538
12539
12540
12541
12542
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.6
-0.4
-1.1
auxotrophy
YNB Glucose
0.1
-0.6
-0.4
-0.5
growth on ricinoleic acid
YNB Glucose
0.0
-0.6
-0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.4
-0.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.5
-0.6
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.5
-0.4
auxotrophy
Dropout Complete
0.0
-0.5
-0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.5
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.1
-0.2
-0.6
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.7
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
-0.1
0.1
growth on ypd
YPD
0.1
-0.2
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.2
0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.4
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
-0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.9
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.7
-0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.6
0.4
-0.3
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