Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4166: 12534 - K12597 AIR1_2 protein AIR1/2, at 1515878 to 1517607 12534 mRNA_4167: 12535 - Hypothetical Protein, at 1518124 to 1518875 12535 mRNA_4168: 12536 - K09487 HSP90B, TRA1 heat shock protein 90kDa beta, at 1519287 to 1521954 12536 mRNA_4169: 12537 - K13299 GSTK1 glutathione S-transferase kappa 1, at 1522602 to 1523728 12537 mRNA_4170: 12538 - KOG1256 Long-chain acyl-CoA synthetases (AMP-forming), at 1524974 to 1527080 12538
Group Condition mRNA_4166 mRNA_4167 mRNA_4168 mRNA_4169 mRNA_4170
12534
12535
12536
12537
12538
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.3 -0.1 0.2 -0.3
growth on oleic acid YNB Glucose -0.0 0.0 -0.0 -0.7 -0.1
growth on ypd YPD -0.4 -0.2 0.3 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.1 0.0 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 0.1 0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.0 0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 0.0 0.1 0.1
auxotrophy Dropout Complete 0.0 -0.4 0.1 -0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.3 0.1 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.4 0.0 0.7 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1 0.0 -0.3 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3 0.0 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.1 -0.3 0.0
growth on ricinoleic acid YNB Glucose 0.1 -0.2 0.1 -0.1 0.0
auxotrophy YNB Glucose 0.2 -0.1 0.1 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.0 0.1 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.0 0.4 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.0 0.1 -0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 0.3 -0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.0 0.3 0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.4 0.2 -0.2 0.1
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