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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4151: 12519 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1476437 to 1477857
12519
mRNA_4152: 12520 - K15026 EIF2A translation initiation factor 2A, at 1478311 to 1480762
12520
mRNA_4153: 12521 - K20347 TMED2, EMP24 p24 family protein beta-1, at 1481592 to 1482556
12521
mRNA_4154: 12522 - K17402 MRPS23 small subunit ribosomal protein S23, at 1482956 to 1484034
12522
mRNA_4155: 12523 - K12492 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1, at 1484305 to 1486151
12523
Group
Condition
mRNA_4151
mRNA_4152
mRNA_4153
mRNA_4154
mRNA_4155
12519
12520
12521
12522
12523
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-1.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-1.3
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.3
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.4
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
1.0
-0.4
growth on ypd
YPD
0.2
0.2
-0.1
auxotrophy
YNB Glucose
-0.2
0.3
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.2
0.3
auxotrophy
Dropout Complete
0.0
0.7
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.5
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.9
0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.5
0.3
growth on oleic acid
YNB Glucose
0.4
0.2
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.9
0.0
growth on ricinoleic acid
YNB Glucose
0.4
0.9
0.1
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