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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4150: 12518 - K15101 SLC25A2_15, ORNT solute carrier family 25 (mitochondrial ornithine transporter) member 2/15, at 1474774 to 1476217
12518
mRNA_4151: 12519 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1476437 to 1477857
12519
mRNA_4152: 12520 - K15026 EIF2A translation initiation factor 2A, at 1478311 to 1480762
12520
mRNA_4153: 12521 - K20347 TMED2, EMP24 p24 family protein beta-1, at 1481592 to 1482556
12521
mRNA_4154: 12522 - K17402 MRPS23 small subunit ribosomal protein S23, at 1482956 to 1484034
12522
Group
Condition
mRNA_4150
mRNA_4151
mRNA_4152
mRNA_4153
mRNA_4154
12518
12519
12520
12521
12522
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.7
-1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.1
-1.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
0.3
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.0
0.5
auxotrophy
YNB Glucose
0.0
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.3
0.4
0.2
growth on oleic acid
YNB Oleic Acid
-0.3
0.2
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.3
1.0
growth on ypd
YPD
0.2
0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.2
0.9
auxotrophy
Dropout Complete
0.1
0.0
0.7
growth on ricinoleic acid
YNB Glucose
-0.2
0.4
0.9
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