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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4143: 12511 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,HMMPfam-Acetyltransferase (GNAT) domain-PF13444,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1456221 to 1457720
12511
mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1457920 to 1460424
12512
mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1460929 to 1462648
12513
mRNA_4146: 12514 - Hypothetical Protein, at 1463545 to 1465730
12514
mRNA_4147: 12515 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,PRINTS-Adrenodoxin reductase family signature-PR00419,SUPERFAMILY--SSF51905, at 1466174 to 1468597
12515
Group
Condition
mRNA_4143
mRNA_4144
mRNA_4145
mRNA_4146
mRNA_4147
12511
12512
12513
12514
12515
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.0
-7.0
-0.4
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.6
-5.2
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.2
-0.9
-5.4
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.7
-5.5
-0.4
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-1.5
-4.2
-0.7
0.2
auxotrophy
YNB Glucose
-0.5
-0.3
-5.2
-0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.5
-3.0
-0.5
-1.2
growth on oleic acid
YNB Glucose
-0.4
0.0
-5.5
0.3
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-5.7
-0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
-3.5
0.0
-1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.1
-5.0
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-3.9
-0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.1
-3.5
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
-2.8
-0.3
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
-0.8
-0.0
-0.5
auxotrophy
Dropout Complete
-0.6
0.2
-0.4
-0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-1.1
-0.0
0.1
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.2
0.7
0.1
-1.4
growth on ypd
YPD
0.1
-0.1
-0.3
0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.6
-0.1
0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
0.7
-0.2
0.2
-0.3
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