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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4138: 12506 - HMMPfam-Cytochrome c oxidase subunit VIIa-PF02238, at 1448098 to 1448646
12506
mRNA_4139: 12507 - K14846 RPF1 ribosome production factor 1, at 1448982 to 1450816
12507
mRNA_4140: 12508 - HMMPfam-Mitochondrial genome maintenance MGM101-PF06420, at 1451089 to 1452303
12508
mRNA_4141: 12509 - Hypothetical Protein, at 1452716 to 1454075
12509
mRNA_4142: 12510 - Hypothetical Protein, at 1454343 to 1455986
12510
Group
Condition
mRNA_4138
mRNA_4139
mRNA_4140
mRNA_4141
mRNA_4142
12506
12507
12508
12509
12510
growth on ricinoleic acid
YNB Ricinoleic Acid
-3.9
-0.8
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.8
-1.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.7
-0.4
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.9
-0.2
growth on ricinoleic acid
YNB Glucose
-1.7
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-1.3
0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
-1.2
0.4
-0.2
auxotrophy
YNB Glucose
-1.1
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
0.1
0.2
growth on ypd
YPD
-0.0
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.5
0.2
-0.1
auxotrophy
Dropout Complete
-0.3
0.2
0.0
growth on oleic acid
YNB Glucose
0.1
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
1.4
-0.1
-0.1
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