Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4127: 12495 - K00793 ribE, RIB5 riboflavin synthase, at 1415327 to 1416353 12495 mRNA_4128: 12496 - K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4, at 1416418 to 1417570 12496 mRNA_4129: 12497 - K03949 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5, at 1418367 to 1418907 12497 mRNA_4130: 12498 - K14812 NGL2 RNA exonuclease NGL2, at 1419173 to 1421594 12498 mRNA_4131: 12499 - KOG3783 Uncharacterized conserved protein, at 1421830 to 1424236 12499
Group Condition mRNA_4127 mRNA_4128 mRNA_4129 mRNA_4130 mRNA_4131
12495
12496
12497
12498
12499
facs on lipid accumulation Sorted Low BODIPY Gate   -1.5   0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3   -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -0.7   -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.1   0.0 -0.5
auxotrophy Dropout Complete   -0.2   -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine   -0.1   -0.1 -0.1
growth on oleic acid YNB Oleic Acid   -0.1   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1   -0.2 -0.2
growth on oleic acid YNB Glucose   -0.1   -0.0 -0.1
auxotrophy YNB Glucose   0.1   0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1   -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.1   -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0   -0.3 0.1
growth on ypd YPD   0.2   -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine   0.1   -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy   0.1   -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6   -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy   -0.2   0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.2   -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy   0.1   0.3 0.0
growth on ricinoleic acid YNB Glucose   0.5   -0.0 0.2
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